Using a Rapid Epigenetic Clock to Align Plant Evolution Timing

Using a Rapid Epigenetic Clock to Align Plant Evolution Timing

Recent discoveries in the field of epigenetics, the study of inheritance of traits that occur without changing ⁣the DNA sequence, have shown that chronological age in mammals correlates with epigenetic changes that accumulate during ⁢the lifetime‌ of an individual.

In humans, this‌ observation has led to‌ the development of epigenetic clocks, which‍ are now extensively used as biomarkers of aging. While these clocks work ⁢accurately from birth‍ until death, they⁣ are set back ⁤to zero in each new⁣ generation.

Now, an ⁢international team ‌co-led by the University of Georgia, ‌the GEOMAR​ Helmholtz Centre for Ocean Research Kiel ⁣and the Technical University of Munich,⁣ shows that epigenetic clocks not only exist in plants, but that these clocks keep ticking accurately over many generations. In a new study ​published ​in the journal Science, the team⁤ describes how this clock can⁤ tell time⁢ with a resolution from decades to⁣ centuries, an accuracy that cannot be achieved with⁢ traditional DNA mutation-based clocks.

The research ⁤sheds new light on microevolutionary questions ‍that ​have been challenging to resolve, such as ⁤the ‍timing of introduction of invasive species and the consequences of human activities since the emergence of modern industrialization.

“Our first hint that an epigenetic clock exists in plants was⁢ revealed when we studied how DNA methylation, a​ chemical ⁣modification to ​DNA sequence underlying many ​epigenetic processes, varied across numerous ​branches in a 300-year-old poplar tree,” said Frank Johannes, professor of plant epigenomics at the Technical University ‌of‌ Munich and co-author⁣ of the study. “We combined DNA methylation ‍data ⁣with branch diameter and coring data to⁢ count tree rings, which reflects branch ‍age. ⁢We were unable to ⁣core one ⁢branch, but we accurately ​estimated its age using ⁢only DNA methylation data, which provided the first clues⁢ there⁣ exists an epigenetic clock in​ plants.”

2023-09-30 06:48:02
Link from phys.org

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